PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma120g00020.1
Common NameZOSMA_120G00020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 370aa    MW: 41299.7 Da    PI: 6.3001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma120g00020.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.8e-12305350655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR +i +++ +L+el+P+     +k ++ +++L +Ave+Ik+Lq
  Zosma120g00020.1 305 SIAERVRRTKISERMRKLQELVPNM----DKQMNTSDMLDLAVEHIKDLQ 350
                       689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.545299349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-15302366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.76E-10303354No hitNo description
Gene3DG3DSA:4.10.280.102.8E-14304362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-11305355IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-9305350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MYGSKDLNLS FTVSSGSDNQ DKEESNLFPR QNQNHHRMSS ELVEYPPHPA HRSAVPETES  60
MFARFMADKP PLEQRRSQLL MPLKATRSER ELEHSSSNLR MLFQSPQQLQ TLHSESPYSV  120
TAAEVEEEEG EEEETRRGVG VGASSNLVQQ RSTPAGFFSP LNVDSVSSGF NMIRGLEEEH  180
DGGGESSSGR LKGQLSFSSR QGSDKGDGTN NVSTTASGSG RCNYIPGYPV SSWEDSVFLS  240
DNLSGGKRPQ WHPSDQSAGL EMRDHRVSDL SSSESNPVME RYLEFQDAVP CKIRAKRGCA  300
THPRSIAERV RRTKISERMR KLQELVPNMD KQMNTSDMLD LAVEHIKDLQ KTIKTLSDDR  360
GRCRCEQKT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008776552.16e-85PREDICTED: transcription factor bHLH130-like
SwissprotQ66GR36e-50BH130_ARATH; Transcription factor bHLH130
TrEMBLA0A0K9Q3300.0A0A0K9Q330_Z
STRINGGRMZM2G153454_P012e-67(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188438103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-48bHLH family protein